Global evolution and expression analysis of BTB-containing ankyrin repeat genes in plants

Authors

  • Peiyan Guan State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai’an, Shandong Province, 271018
  • Lixue Sun State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai’an, Shandong Province, 271018
  • Rui Yang State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai’an, Shandong Province, 271018
  • Huiyang Gao State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai’an, Shandong Province, 271018
  • Pu Liu State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai’an, Shandong Province, 271018
  • Chengchao Zheng State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai’an, Shandong Province, 271018
  • Shizhong Zhang State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai’an, Shandong Province, 271018

Keywords:

ANK, BTB, bioinformatics, expression pattern, abiotic stress, evolution

Abstract

The ankyrin (ANK) repeat domain and bric-a-brac, tram-track, broad complex (BTB) domains, which are the most common protein motifs in eukaryotic proteins, regulate diverse developmental and biological processes in plants. In this study, 230 BTB-containing ANK (ANK-BTB) homologs were identified and categorized into two groups (class I and class II) in plants. Phylogenetic and comparative analysis found that ANK-BTB genes originated in bryophytes and ferns and their number expanded by segment duplications. All of the selected ANK-BTB genes were expressed in two or more tested tissues, indicating that these genes are involved in various aspects of developmental processes in Arabidopsis. Furthermore, the ANK-BTB genes responded to abiotic stresses (NaCl, mannitol, heat and cold) and ABA treatments. To our knowledge, this study is the first report of a genome-wide analysis of ANK-BTB genes. This study also provides valuable information to understand the classification, evolution and putative functions of the gene family.

https://doi.org/10.2298/ABS170306042G

Received: March 6, 2017; Revised: June 14, 2017; Accepted: September 26, 2017; Published online: October 30, 2017

How to cite this article: Guan P, Sun L, Yang R, Gao H, Liu P, Zheng C, Zhang S. Global evolution and expression analysis of BTB-containing ankyrin repeat genes in plants. Arch Biol Sci. 2018;70(2):249-58.

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Author Biography

Shizhong Zhang, State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai’an, Shandong Province, 271018


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Published

2018-04-27

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1.
Guan P, Sun L, Yang R, Gao H, Liu P, Zheng C, Zhang S. Global evolution and expression analysis of BTB-containing ankyrin repeat genes in plants. Arch Biol Sci [Internet]. 2018Apr.27 [cited 2024Dec.22];70(2):249-58. Available from: https://serbiosoc.org.rs/arch/index.php/abs/article/view/1532

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Vol. 70 No. 2 (2018)

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